A large number of microbial species and the rapid differentiation of strains require an economical and rapid method to sequence a large number of strains over a large area to study the information of variation among strains. Microbial resequencing, which is high-throughput sequencing data based on small fragment libraries, is a sequencing analysis technique that analyzes high-throughput data of a particular microorganism by comparing it with a closely related reference genome.

What We Offer

The resequencing provided by Lifeasible can obtain a series of variation information such as SNP, InDel, SV, etc. of the target microbial genome to the reference genome, featuring accurate and rapid detection of variation information systematically, as well as further studies on species evolution, population characteristics, selection pressure, etc. We can also try to predict and resolve the trait differences between genomes to complete the analysis of target microorganisms.

Category	Content
Information analysis	Raw data collation statistics
	Data quality control
	High-quality data acquisition
	Reference genome collation
	Sequence alignment analysis
	Sequence alignment results statistics
	SNP detection and annotation
	INDEL detection and annotation
	CNV analysis
	SV analysis
	Visualization of non-synonymous SNPs and Indel
	Population SNP-based evolutionary tree reconstruction
	Population SNP-based PCA analysis
	Genome sequence splicing
	Evaluation of genome splicing effect
	Whole gene sequence alignment
	Functional analysis of the region
	Exogenous insert detection
	Drug resistance locus detection

Service Flow

We Do Better

Lifeasible has built a comprehensive service platform for plant microbiology research and analysis. The platform focuses on providing strong technical service support for the research needs of enterprises, universities, research institutes, and hospitals, and our team has rich experience in development and implementation and has completed a variety of service commissions for plant microbiology research. We are always your most trustworthy partner.

Reference

1. Enhua X., et al., "The Reference Genome of Tea Plant and Resequencing of 81 Diverse Accessions Provide Insights into Its Genome Evolution and Adaptation." Molecular Plant, 2020, 13(7): 1013-1026.

*If your organization requires the signing of a confidentiality agreement, please contact us by email.

For research use only, not intended for any clinical use.

Related Services

• Microbial Detection and Contamination Analysis
• Microbial Diversity Sequencing Analysis
• Metagenomics Sequencing Analysis
• Microbial Genome De Novo Sequencing